Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886625.1_cds_XP_016440752.1_36180
CDS Infomation

[gene=LOC107766479] [db_xref=GeneID:107766479] [protein=pentatricopeptide repeat-containing protein At5g40400-like isoform X2] [protein_id=XP_016440752.1] [location=43784..45223] [gbkey=CDS]
Sequence

ATGAAGATTTTGTCTGAATTGGTTGATTTGAAGAGAGATGGACTGGTCAGCGTAGATTTG
TTTGAGAGTTTGCTTTCAGCTAGTGGTGTATGCAATTGGGACCCTGTTGTGTTTGATATG
CTAATTAAGGCTTTTCTCAAGGTGAATATGGTGAAAGATGGTTTTAGAGCTTTTAGAAAG
ACGGTGAAGCATGGTATGTGCCCGAGTGTTATTACCATAAACTGTCTTTTAAATGGTCTT
TCAAAGTTGAATTATAGCAAAAAATGTTGGGAAGTCTATGCTGAAATGGAAAGAATAGGA
GTGCACCCAAATGCGTGTACCTTCAATATATTAACTCTTGTCTTGTGCAAGGATGAAGAT
GCGAACAAGGTCAATGACTTCTTGGAGAAAATGGAAGAAGAAGGGTTTCAACCTGATATA
GTTACATATAATACATTAGTTAGTAGCTATTGTAGGAAAGAAAGATTGAAAGATGCAGTC
TACTTGTATCAAATTATGTACATTAGAGGCGTATTACCAGATTTGTTCACATACACTAGT
TTGATAAATGGCTTTTGTAGGAAAGGAAATGTGAGAGATGCTCATCAGTTGTTCCTGAGA
ATGGCTGACAGAGGGTTAAAACCAGATCTTATTTTGTATAACACTCTTATTTGTGGTTAT
TGCAAAGAGGGGATGATGCAAGAAGCACGGTTTCTTTTGCATGACATGATTGGAGAAGGG
ATGTACCCTGATAAGTTCACTTGTTCGGTTCTTGTACAAGGATATCAAAAGCAGGATAAT
CTAGTTTCCGCTGTGAATTTCGTCACAGAGCTTCAAAGGTTTAGATTTGTGGTATCTCAT
GATATATACAACTATCTAATTGCTTCTCTTTGTATGGAGAATCGACCATTTGCGGCCAAG
GCTCTATTGGATCGAGTATCTGGCAATGGATATGAGCCTGACAATATGGTCTATAGGGAG
TTGATTGAATCTTTCTGCAGATGGAATTGCCCTGATGAGGCCTTGTATTTGAAAGCTGAG
ATGGTGTCAAAAGATTTGAAGCCCGATATATGTACATATAGAGCTATAATTAAGAGTTTG
TGTAAATTAAGCCGAAGCATGGAGGCTAATTCCTTGATGAGAGAAATGACTGATTTTGAT
GTGCTGCCTGATATTGAAGTTTGTAGAGCTTTAGTAAATGGGCATTGCAGAGAAAACAAT
TTCTGTGAGGCGCAATCGCTGTTAAGCTTCTTTGCTCAAGAATTTGGAATATTTGACACA
ATTTGTTACAACGCAATTGTCAGGTTTCTAAGCGCTGAATGTGATATTGCCAAATTGTTG
AAATTTCAAGATAAAATGAGGAAAGTGGGTTTTGCGCCAAATCAGCTGACATGCAAGTAC
GTAATTGATGGATTACAGAAAGCTGTGAGAGTCCACAAAATCAACACCCCAGTGCCGTAA

Peptide Sequence

PEP ID

XP_016440752.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g40400-like isoform X2 [Nicotiana tabacum]
Sequence

MKILSELVDLKRDGLVSVDLFESLLSASGVCNWDPVVFDMLIKAFLKVNMVKDGFRAFRK
TVKHGMCPSVITINCLLNGLSKLNYSKKCWEVYAEMERIGVHPNACTFNILTLVLCKDED
ANKVNDFLEKMEEEGFQPDIVTYNTLVSSYCRKERLKDAVYLYQIMYIRGVLPDLFTYTS
LINGFCRKGNVRDAHQLFLRMADRGLKPDLILYNTLICGYCKEGMMQEARFLLHDMIGEG
MYPDKFTCSVLVQGYQKQDNLVSAVNFVTELQRFRFVVSHDIYNYLIASLCMENRPFAAK
ALLDRVSGNGYEPDNMVYRELIESFCRWNCPDEALYLKAEMVSKDLKPDICTYRAIIKSL
CKLSRSMEANSLMREMTDFDVLPDIEVCRALVNGHCRENNFCEAQSLLSFFAQEFGIFDT
ICYNAIVRFLSAECDIAKLLKFQDKMRKVGFAPNQLTCKYVIDGLQKAVRVHKINTPVP

Transcript Sequence

Gene sequence data has not been registered.